BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003A08SP1|AL425058
(818 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig382 1003 0.0
>3x_Contig382
Length = 1656
Score = 1003 bits (493), Expect = 0.0
Identities = 558/595 (93%), Gaps = 1/595 (0%)
Strand = Plus / Plus
Query: 1 ttcaatkagtgtaatacggaagaattcgactctacaacattgcatggattactttcgact 60
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 ttcaaagagtgtaatacggaagaattcgactctacaacattgcatggattactttcgact 1113
Query: 61 ttggwwgagtatgagagacgtaagagtaagaagacgaaggtggatatcattacgttcaga 120
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 ttggaagagtatgagagacgtaagagtaagaagacgaaggtggatatcattacgttcaga 1173
Query: 121 ggtatcatacggaagctcatctccagtgcttttgattcatcacagttcaatccggtaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 ggtatcatacggaagctcatctccagtgcttttgattcatcacagttcaatccggtaaat 1233
Query: 181 ttccgtattgtttygtttkatggayawctwttcattaaggrtgtyaagacagacgcttcg 240
||||||||||||| |||| ||||| | || |||||||||| || |||||||||||||||
Sbjct: 1234 ttccgtattgtttcgtttgatggacaactattcattaaggaagtcaagacagacgcttcg 1293
Query: 241 gaaacctccattaacragaatagggagtcgttacaggcaagggcatattacagtggttac 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1294 gaaacctccattaacaagaatagggagtcgttacaggcaagggcatattacagtggttac 1353
Query: 301 raatttgadgcacttgcwaccttatcgctgccactatccgttggtacccagaactacatt 360
||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1354 aaatttgaagcacttgcaaccttatcgctgccacta-ccgttggtacccagaactacatt 1412
Query: 361 ggraaagagacctaarargattatkaacaatggggaccaattcatctcaatggttagaac 420
|| |||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1413 ggaaaagagacctaaaaagattattaacaatggggaccaattcatctcaatggttagaac 1472
Query: 421 aggaataggtaartgtragatattgatcggtgcagaagtggactgtdtttttgattttkr 480
|||||||||||| ||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1473 aggaataggtaaatgtaagatattgatcggtgcacaagtggactgtatttttgattttaa 1532
Query: 481 rgaggattcagatgacaacctgaagcattacgcagagttgaratgtaccacaatggtcaa 540
||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1533 agaggattcagatgacaacctgaagcattacgcacagttgaaatgtaccacaatggtcaa 1592
Query: 541 taccgtttccgatgcgcataarttcgaacgtkagttgtttaagacctggttacag 595
|||| || |||||||||||| ||||||||| |||||||||| |||||| |||||
Sbjct: 1593 tacccgtttcgatgcgcataaattcgaacgtaagttgtttaaaacctggatacag 1647
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3203
Number of Sequences: 1807
Number of extensions: 3203
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 818
length of database: 10,358,551
effective HSP length: 16
effective length of query: 802
effective length of database: 10,329,639
effective search space: 8284370478
effective search space used: 8284370478
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)